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Table 1 Phenotype and length of the inserted marker fragment in the eight ∆trp3 strains

From: Auxotrophic mutations of Trichophyton rubrum created by in vitro synthesized Cas9 ribonucleoprotein

Strain

Phenotype*1

Fragment length*2

Ura

Trp

PCR*3

Sequenced*4

STRB012

P

P

NA

 

NA

STRB018

A

P

NA

 

NA

∆trp3_c1_1

P

A

2130 bp

+

1955 bp

∆trp3_c1_2

P

A

270 bp

+

0 bp*5

∆trp3_c1_3

P

A

2880 bp

+

2962 bp

∆trp3_c1_4

P

A

0 bp

NA

∆trp3_c1_5

P

A

2370 bp

+

2380 bp

∆trp3_c2_1

P

A

1900 bp

NA

∆trp3_c2_2

P

A

990 bp

NA

∆trp3_c2_3

P

A

2250 bp

NA

  1. *1 A: Auxotrophic, P: Prototrophic
  2. *2 length of the inserted ura3 marker fragment
  3. *3 calculated from agarose gel electrophoresis with the LabImage Version 2.62 software. The last digit of the values were rounded up
  4. *4 counted from the Sanger sequencing result
  5. *5 no ura3 fragment was inserted, but an unintentional bacterial DNA fragment