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Table 5 Details of assay reactions for determination of enzyme activity and inhibition assays in the presence of various dilutions of P. sidoides extract

From: Novel kinase platform for the validation of the anti-tubercular activities of Pelargonium sidoides (Geraniaceae)

Enzyme

Enzyme Activity Assay reaction mixtures

P. sidoides inhibition Assay reaction mixtures

Incubation time

NDK

100 mM K-PO4 buffer (pH 6.8), 250 mM KCl

5 nM enzyme, 0.2 M Thymidine diphosphate

100 mM K-PO4 buffer (pH 6.8), 250 mM KCl

5 nM enzyme, 0.2 M Thymidine diphosphate

40 mins

HSK

50 mM HEPES buffer (pH 7.0), 450 mM KCl

704 nM enzyme, 10 mM Homoserine

50 mM HEPES buffer (pH 7.0), 450 mM KCl

704 nM enzyme, 10 mM Homoserine

4 h

AK

100 mM Tris buffer (pH 7.0), 250 mM KCl

223 nM enzyme, 10 mM Na-acetate

100 mM Tris buffer (pH 7.0), 250 mM KCl

223 nM enzyme, 10 mM Na-acetate

24 h

GK

100 mM Tris buffer (pH 7.0), 250 mM KCl

208.6 nM enzyme, 100 mM Glycerol

100 mM Tris buffer (pH 7.0), 250 mM KCl

208.6 nM enzyme, 100 mM Glycerol

24 h

ThiL

100 mM Tris buffer (pH 8.0), 250 mM KCl

2074 nM enzyme, 1 mM Thiamine monophosphate

100 mM Tris buffer (pH 8.0), 250 mM KCl

2074 nM enzyme, 1 mM Thiamine monophosphate

5 h

RBKS

100 mM Tris buffer (pH 7.2), 100 mM KCl

250 nM enzyme, 10 mM d-ribose

100 mM Tris buffer (pH 7.2), 100 mM KCl

250 nM enzyme, 10 mM d-ribose

4 h

AsK

100 mM Tris-HCl buffer (pH 7.5), 178.2 nM enzyme

10 mM l-Aspartic acid

100 mM Tris-HCl buffer (pH 7.5), 178.2 nM enzyme

10 mM l-Aspartic acid

6 h

SK

100 mM K-PO4 buffer (pH 6.8), 500 mM KCl

10 nM enzyme, 8 mM shikimic acid

100 mM K-PO4 buffer (pH 6.8), 500 mM KCl

10 nM enzyme, 8 mM shikimic acid

20 mins