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Table 2 Genes that were down-regulated (fold change) in SCNT placentas versus in control placentas

From: Abnormal gene expression in regular and aggregated somatic cell nuclear transfer placentas

Gene symbol

Accession No.

Folder Δ SCNT/Con

Folder Δ Agg/Con

Gene symbol

Accession No.

Folder Δ SCNT/Con

Folder Δ Agg/Con

1300017J02Rik

NM_027918.1

−2.67**

−1.34

Cbx7

NM_144811.3

−3.10**

1.12

Ly6g6c

NM_023463.3

−3.82**

−1.92

Osta

NM_145932.3

−2.88*

1.18

Pcyox1

NM_025823

−2.16**

−1.10

Entpd2

NM_009849.1

−3.64**

−1.10

Lamb3

NM_008484.2

−2.94*

−1.53

Bex4

NM_212457.1

−3.50**

−1.07

Ang

NM_007447.2

−2.26*

−1.20

Serpina10

NM_144834.3

−2.39*

1.36

Bmp4

NM_007554.2

−2.59**

−1.42

Fga

NM_010196.1

−3.51**

−1.10

LOC100046120

XM_001475611.1

−2.62**

−1.51

1700045I19Rik

NM_028842.1

−3.47**

−1.11

Aqp8

NM_007474.1

−2.32**

−1.36

Fga

NM_010196.2

−3.47**

−1.12

Heph

NM_010417.1

−2.52*

−1.51

BC040758

NM_001033364.1

−3.34**

−1.12

Serping1

NM_009776.1

−2.35**

−1.43

Maob

NM_172778.1

−2.95*

1.01

Doxl2

NM_001029987.1

−2.18**

−1.33

BC040758

NM_001033364.1

−3.34**

−1.12

Saa3

NM_011315.3

−2.95**

−1.79

Fcgrt

NM_010189.1

−2.75**

1.07

Aqp8

NM_007474.1

−2.19**

−1.34

Gdpd3

NM_024228.2

−3.60**

−1.23

Klk4

NM_019928.1

−2.79**

−1.72

Cldn2

NM_016675.3

−2.93**

−1.01

Serpind1

NM_008223.2

−2.67*

−1.67

Psca

NM_028216.1

−4.43**

−1.53

Abp1

NM_029638.1

−2.06**

−1.33

1600015I10Rik

NM_001081273.1

−4.64**

−1.61

Krt14

NM_016958.1

−2.11*

−1.42

Bex2

XM_977338.1

−2.52*

1.14

Scg5

NM_009162.3

−2.77*

−1.95

Apom

NM_018816.1

−3.27**

−1.16

Mustn1

NM_181390.2

−2.05*

−1.65

8430408G22Rik

NM_145980.1

−2.12*

1.31

Tacstd2

NM_020047.3

−2.07**

−1.71

Acox2

NM_053115.1

−2.53**

1.08

Sfrp5

NM_018780.2

−2.02**

−1.88

Spp2

NM_029269.1

−2.91**

−1.06

Sftpd

NM_009160.1

−4.14**

1.13

Vdr

NM_009504.3

−2.19*

1.21

Tph1

NM_009414.2

−2.65*

1.59

Itih3

NM_008407.1

−2.64*

−1.00

2010109I03Rik

NM_025929.2

−2.75**

1.47

Spink3

NM_009258.2

−2.81*

−1.08

Amn

NM_033603.2

−4.03**

−1.14

Apoa2

NM_013474.1

−2.77*

−1.07

Gene symbol

Accession No.

Folder Δ SCNT/Con

Folder Δ Agg/Con

Gene symbol

Accession No.

Folder Δ SCNT/Con*

Folder Δ Agg/Con

Significantly reduced in NT

Significantly reduced in NT

Tfrc

NM_011638.3

−3.08**

−1.20

C3

NM_009778.1

−2.23*

−1.06

Kng1

NM_023125.2

−3.07*

−1.20

Igfbp6

NM_008344.2

−3.64**

−1.76

Fcgr3

NM_010188.4

−2.56*

−1.02

Popdc3

NM_024286.1

−3.68**

−1.79

Dab2

NM_001008702.1

−2.34**

1.06

Muc13

NM_010739.1

−2.09**

−1.03

Gldc

NM_138595.1

−2.66**

−1.08

Lcn2

NM_008491.1

−2.42*

−1.20

Serpina1b

NM_009244.4

−2.80**

−1.14

Inhba

NM_008380.1

−2.81**

−2.25

Tfrc

NM_011638.3

−2.87**

−1.18

Chac1

NM_026929.3

−2.27*

−2.09

Cfi

NM_007686.2

−2.20*

1.10

Nrn1l

NM_175024.3

−2.49*

−2.49*

Ltf

NM_008522.3

−2.30**

1.05

Tnfrsf11b

NM_008764.3

−2.15*

−2.30

Gpc3

NM_016697.2

−2.50*

−1.05

Slpi

NM_011414.2

−4.56**

−2.09

Mgst1

NM_019946.3

−2.51*

−1.06

    

Fgg

NM_133862.1

−2.95**

−1.25

Significantly reduced in aggregation

Nr1h4

NM_009108.1

−3.16*

−1.35

Nppb

NM_008726.3

−1.46

−3.14**

Dab2

NM_023118.1

−2.31

1.01

1200015F23Rik

NM_001033136.2

−1.00

−2.71*

Kng1

NM_023125.2

−2.87

−1.24

Uap1

NM_133806.4

1.27

−2.72**

Slc7a9(prob1)

NM_021291.1

−3.04

−1.34

Ctsm

NM_022326.3

1.12

−4.82**

Slc7a9(prob2)

NM_021291.1

−2.82

−1.24

    

Irf6

NM_016851.2

−2.43

−1.08

    

Trf

NM_133977.2

−2.37

−1.08

    

Serpina1d

NM_009246.3

−2.59

−1.19

    

Sema4a

NM_013658.2

−2.60

−1.20

    

Serpina1b

NM_009244.4

−2.62

−1.21

    

Gipc2

NM_016867.1

−2.56

−1.19

    

Kng2

NM_201375.1

−2.59

−1.20

    

Slc27a2

NM_011978.2

−2.96

−1.40

    
  1. *Significantly reduced in NT alone, *p < 0.05; **p < 0.01