Cell line | Range | Markers | Top5 | Top10 | Top20 | Expected top20 | Correlation of 20th |
---|
K562
| 0.1% to 3% | 486 | 4 | 7 | 13 | 0 to 1 (0.523) | 0.81 |
HL60
| 5% to 13% | 1237 | 3 | 5 | 5 | 1 to 2 (1.30) | 0.93 |
Ly18
| 15% to 40% | 901 | 5 | 9 | 14 | 1 (0.95) | 0.95 |
Jurkat
| 46.7% to 73.9% | 792 | 2 | 3 | 4 | 1 (0.83) | 0.98 |
- range: range of fractions for the cell type in the mixtures. markers: number of markers defined as positives from the analysis of the pure samples and present at least in one of the mixtures; top5 (10, 20): number of positive markers (see Methods) among the 5 (10, 20) most correlated probesets; expected top20: expected numbers of markers if we randomly selected 20 probesets; correlation of 20th: value of the correlation coefficient for the 20th most correlated probe set.